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self ligation  (TaKaRa)


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    Structured Review

    TaKaRa self ligation
    Self Ligation, supplied by TaKaRa, used in various techniques. Bioz Stars score: 97/100, based on 7354 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/t4+ligation/T4+DNA+Ligase/bio_rxiv__64898__2026__05__09__724044-74-23-28
    Average 97 stars, based on 7354 article reviews
    self ligation - by Bioz Stars, 2026-09
    97/100 stars

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    Related Articles

    Amplification:

    Article Title: Mouse medulloblastoma driven by CRISPR activation of cellular Myc
    Article Snippet: .. The U6 stuffer insert was amplified from Lenti-V6 using U6 Forward primer 5′-AATAATCAATGTCGA GAGGGCCTATTTCCCATGATTCCT-3′ and U6 Reverse primer 5′-ATGGGCCCTCGTCGACCAATTCCCACTCCTTTCAAGACC-3′. dCas9-VP160-T2A-Puro was released from pAC94-pmax-dCas9-VP160-T2A-Puro by EcoRI digestion and cloned into EcoRI digested pT2K-CaGGS-IRES-mCherry by Gibson Assembly . sgRNA-M5, -M7, and -M 9 were cloned individually into pT2K-U6-stuffer-CAGGS-IRES-CFP. pT2K-U6-stuffer-CAGGS-IRES-CFP was digested with BsmBI to remove the stuffer DNA and annealed guide RNAs were inserted using T4 ligation (Clontech, #6023). pT2K-U6-sgRNA-M5-CAGGS-IRES-CFP was used as the backbone to clone pT2K-U6-sgRNA-M5, 7, 9-CAGGS-IRES-CFP. pT2K-U6-sgRNA-M7-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M7 along with the U6 promoter and sgRNA scaffold using 5′-ATAGGCCCTCCCAATTCCCACTCCTTTCAAGAC-3′ and 5′-AAGGAGTGGGAATTGGTC GAGAGGGCCTATTTCCCA-3′. pT2K-U6-sgRNA-M9-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M9 along with the U6 promoter and sgRNA scaffold using 5′-GCCAGATGGGCCCTCGTCGACCAATTCCCACT-3′ and 5′-TGGGAATTGGGAGGGCCT ATTTCCCATGATTCCT3′. ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes.
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Clone Assay:

    Article Title: Mouse medulloblastoma driven by CRISPR activation of cellular Myc
    Article Snippet: .. The U6 stuffer insert was amplified from Lenti-V6 using U6 Forward primer 5′-AATAATCAATGTCGA GAGGGCCTATTTCCCATGATTCCT-3′ and U6 Reverse primer 5′-ATGGGCCCTCGTCGACCAATTCCCACTCCTTTCAAGACC-3′. dCas9-VP160-T2A-Puro was released from pAC94-pmax-dCas9-VP160-T2A-Puro by EcoRI digestion and cloned into EcoRI digested pT2K-CaGGS-IRES-mCherry by Gibson Assembly . sgRNA-M5, -M7, and -M 9 were cloned individually into pT2K-U6-stuffer-CAGGS-IRES-CFP. pT2K-U6-stuffer-CAGGS-IRES-CFP was digested with BsmBI to remove the stuffer DNA and annealed guide RNAs were inserted using T4 ligation (Clontech, #6023). pT2K-U6-sgRNA-M5-CAGGS-IRES-CFP was used as the backbone to clone pT2K-U6-sgRNA-M5, 7, 9-CAGGS-IRES-CFP. pT2K-U6-sgRNA-M7-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M7 along with the U6 promoter and sgRNA scaffold using 5′-ATAGGCCCTCCCAATTCCCACTCCTTTCAAGAC-3′ and 5′-AAGGAGTGGGAATTGGTC GAGAGGGCCTATTTCCCA-3′. pT2K-U6-sgRNA-M9-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M9 along with the U6 promoter and sgRNA scaffold using 5′-GCCAGATGGGCCCTCGTCGACCAATTCCCACT-3′ and 5′-TGGGAATTGGGAGGGCCT ATTTCCCATGATTCCT3′. ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes.
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Ligation:

    Article Title: Mouse medulloblastoma driven by CRISPR activation of cellular Myc
    Article Snippet: .. The U6 stuffer insert was amplified from Lenti-V6 using U6 Forward primer 5′-AATAATCAATGTCGA GAGGGCCTATTTCCCATGATTCCT-3′ and U6 Reverse primer 5′-ATGGGCCCTCGTCGACCAATTCCCACTCCTTTCAAGACC-3′. dCas9-VP160-T2A-Puro was released from pAC94-pmax-dCas9-VP160-T2A-Puro by EcoRI digestion and cloned into EcoRI digested pT2K-CaGGS-IRES-mCherry by Gibson Assembly . sgRNA-M5, -M7, and -M 9 were cloned individually into pT2K-U6-stuffer-CAGGS-IRES-CFP. pT2K-U6-stuffer-CAGGS-IRES-CFP was digested with BsmBI to remove the stuffer DNA and annealed guide RNAs were inserted using T4 ligation (Clontech, #6023). pT2K-U6-sgRNA-M5-CAGGS-IRES-CFP was used as the backbone to clone pT2K-U6-sgRNA-M5, 7, 9-CAGGS-IRES-CFP. pT2K-U6-sgRNA-M7-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M7 along with the U6 promoter and sgRNA scaffold using 5′-ATAGGCCCTCCCAATTCCCACTCCTTTCAAGAC-3′ and 5′-AAGGAGTGGGAATTGGTC GAGAGGGCCTATTTCCCA-3′. pT2K-U6-sgRNA-M9-CAGGS-IRES-CFP was used as a template to amplify the sgRNA-M9 along with the U6 promoter and sgRNA scaffold using 5′-GCCAGATGGGCCCTCGTCGACCAATTCCCACT-3′ and 5′-TGGGAATTGGGAGGGCCT ATTTCCCATGATTCCT3′. ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes.
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Article Title: Bioinformatics analysis and transcriptional regulation of TORC1 gene through transcription factors NRF1 and Smad3 in bovine preadipocytes.
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel through gel extraction kit (Omega, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5 (Takara, Japan).

    Article Title: Function and Transcriptional Regulation of Bovine TORC2 Gene in Adipocytes: Roles of C/EBPγ , XBP1 , INSM1 and ZNF263
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel with a gel extraction kit ((Omega Bio-tek, Norcross, GA, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5α (Takara, Japan).

    Article Title: Genetic variants in the TORC2 gene promoter and their association with body measurement and carcass quality traits in Qinchuan cattle
    Article Snippet: The PCR amplicons were cloned into pMD-19 T-Vector (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The haplotype DNA was then extracted from the gel through the E.Z.N.A gel extraction kit (Omega, Biotek, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector), which was also digested with Sac I and Hind III (Takara, Japan) restriction enzymes. ..

    Plasmid Preparation:

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Article Title: Ring finger protein 213 regulates B-cell receptor signaling, metabolism, and development in B lymphocytes.
    Article Snippet: .. The amplified DNA fragments were subsequently cloned and inserted into the pcDNA3.1 vector by HindIII (NEB, R3104S) and XbaI (NEB, R0145S) dual digestion, followed by T4 ligation (Takara, 2011B). ..

    Gel Extraction:

    Article Title: Bioinformatics analysis and transcriptional regulation of TORC1 gene through transcription factors NRF1 and Smad3 in bovine preadipocytes.
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel through gel extraction kit (Omega, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5 (Takara, Japan).

    Article Title: Function and Transcriptional Regulation of Bovine TORC2 Gene in Adipocytes: Roles of C/EBPγ , XBP1 , INSM1 and ZNF263
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel with a gel extraction kit ((Omega Bio-tek, Norcross, GA, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5α (Takara, Japan).

    Article Title: Genetic variants in the TORC2 gene promoter and their association with body measurement and carcass quality traits in Qinchuan cattle
    Article Snippet: The PCR amplicons were cloned into pMD-19 T-Vector (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The haplotype DNA was then extracted from the gel through the E.Z.N.A gel extraction kit (Omega, Biotek, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector), which was also digested with Sac I and Hind III (Takara, Japan) restriction enzymes. ..

    Luciferase:

    Article Title: Bioinformatics analysis and transcriptional regulation of TORC1 gene through transcription factors NRF1 and Smad3 in bovine preadipocytes.
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel through gel extraction kit (Omega, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5 (Takara, Japan).

    Article Title: Function and Transcriptional Regulation of Bovine TORC2 Gene in Adipocytes: Roles of C/EBPγ , XBP1 , INSM1 and ZNF263
    Article Snippet: PCR amplicons were cloned into t vector pMD 19 (simple) (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The DNA was extracted from the gel with a gel extraction kit ((Omega Bio-tek, Norcross, GA, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector). .. Ligated pGL3 basic vector with inserts of the target fragments were then cloned into DH5α (Takara, Japan).

    Article Title: Genetic variants in the TORC2 gene promoter and their association with body measurement and carcass quality traits in Qinchuan cattle
    Article Snippet: The PCR amplicons were cloned into pMD-19 T-Vector (Takara, Japan) and digested with Sac I and Hind III restriction enzymes (Takara, Japan). .. The haplotype DNA was then extracted from the gel through the E.Z.N.A gel extraction kit (Omega, Biotek, Inc, USA) and ligated through T4 ligation (Takara, Japan) into pGL3 basic (luciferase reporter vector), which was also digested with Sac I and Hind III (Takara, Japan) restriction enzymes. ..



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